WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49E10.4 Sequence Name  Y49E10.4
Length (nt)  1311   Chromosome Location  III: 12379042-12379173
Chromosome . Primary Identifier  III Chromosome Location . Start  12379042
Chromosome Location . End  12379173
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22222 Y49E10.4 48.7 436 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00057024
WBRNAi00020781
WBRNAi00076803
WBRNAi00006809
WBRNAi00037298

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.4 12379042 12379173 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013030 Y49E10.4 Y49E10.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.4 12379042 12379173 -1
CDS:Y49E10.4 12379218 12379778 -1
CDS:Y49E10.4 12379843 12380302 -1
CDS:Y49E10.4 12380361 12380484 -1
CDS:Y49E10.4 12380529 12380562 -1

1 Sequence

Length
1311

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49E10.4.2 Y49E10.4.2 2017   III: 12378996-12383809
Transcript:Y49E10.4.1 Y49E10.4.1 1379   III: 12379000-12380588