WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y49E10.15.1 Sequence Name  Y49E10.15.1
Length (nt)  411   Chromosome Location  III: 12429172-12429629
Chromosome . Primary Identifier  III Chromosome Location . Start  12429172
Chromosome Location . End  12429629 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004919 snr-6 Y49E10.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y49E10.15 Y49E10.15 273   III: 12429295-12429511

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.15.1 12429172 12429629 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon107154   340   III: 12429172-12429511 Caenorhabditis elegans
Exon107155   71   III: 12429559-12429629 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y49E10.15.1 12429172 12429629 -1

1 Sequence

Length
411

1 Sequence Ontology Term

Identifier Name Description
transcript