WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y49E10.19 Sequence Name  Y49E10.19
Length (nt)  3480   Chromosome Location  III: 12446675-12446935
Chromosome . Primary Identifier  III Chromosome Location . Start  12446675
Chromosome Location . End  12446935
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y49E10.19

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33878 ANI-1 126.8 1159 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00009361
WBRNAi00071735
WBRNAi00101984
WBRNAi00117492
WBRNAi00117494
WBRNAi00117491
WBRNAi00117493
WBRNAi00071374
WBRNAi00026787
WBRNAi00000218
WBRNAi00084999
WBRNAi00101983
WBRNAi00002673
WBRNAi00057013
WBRNAi00085011
WBRNAi00085010
WBRNAi00085009
WBRNAi00108350
WBRNAi00112042
WBRNAi00101985
WBRNAi00115213
WBRNAi00108351

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.19 12446675 12446935 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013038 ani-1 Y49E10.19 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y49E10.19 12446675 12446935 -1
CDS:Y49E10.19 12446987 12447358 -1
CDS:Y49E10.19 12448105 12448444 -1
CDS:Y49E10.19 12448504 12449756 -1
CDS:Y49E10.19 12450394 12450537 -1
CDS:Y49E10.19 12450602 12450868 -1
CDS:Y49E10.19 12452277 12452992 -1
CDS:Y49E10.19 12453058 12453184 -1

1 Sequence

Length
3480

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y49E10.19.2 Y49E10.19.2 3950   III: 12446348-12453375
Transcript:Y49E10.19.1 Y49E10.19.1 3820   III: 12446353-12453202