WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.5.1 Sequence Name  Y37D8A.5.1
Length (nt)  1043   Chromosome Location  III: 12854049-12855494
Chromosome . Primary Identifier  III Chromosome Location . Start  12854049
Chromosome Location . End  12855494 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012547 Y37D8A.5 Y37D8A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.5 Y37D8A.5 963   III: 12854095-12854190

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.5.1 12854049 12855494 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108024   142   III: 12854049-12854190 Caenorhabditis elegans
Exon108026   662   III: 12854234-12854895 Caenorhabditis elegans
Exon108028   209   III: 12855111-12855319 Caenorhabditis elegans
Exon108030   30   III: 12855465-12855494 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.5.1 12854049 12855494 -1

1 Sequence

Length
1043

1 Sequence Ontology Term

Identifier Name Description
transcript