WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y37D8A.6.2 Sequence Name  Y37D8A.6.2
Length (nt)  832   Chromosome Location  III: 12856830-12870297
Chromosome . Primary Identifier  III Chromosome Location . Start  12856830
Chromosome Location . End  12870297 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012548 Y37D8A.6 Y37D8A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.6 Y37D8A.6 399   III: 12856952-12857125

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.6.2 12856830 12870297 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108033   296   III: 12856830-12857125 Caenorhabditis elegans
Exon108037   96   III: 12857198-12857293 Caenorhabditis elegans
Exon108040   144   III: 12857768-12857911 Caenorhabditis elegans
Exon108049   123   III: 12869224-12869346 Caenorhabditis elegans
Exon108051   80   III: 12869447-12869526 Caenorhabditis elegans
Exon108053   93   III: 12870205-12870297 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.6.2 12856830 12870297 -1

1 Sequence

Length
832

1 Sequence Ontology Term

Identifier Name Description
transcript