WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y37D8A.9a.1 Sequence Name  Y37D8A.9a.1
Length (nt)  1499   Chromosome Location  III: 12871029-12874656
Chromosome . Primary Identifier  III Chromosome Location . Start  12871029
Chromosome Location . End  12874656 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37D8A.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003406 mrg-1 Y37D8A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y37D8A.9a Y37D8A.9a 1008   III: 12871518-12871667

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.9a.1 12871029 12874656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108054   639   III: 12871029-12871667 Caenorhabditis elegans
Exon108056   214   III: 12872812-12873025 Caenorhabditis elegans
Exon108058   149   III: 12873952-12874100 Caenorhabditis elegans
Exon108061   497   III: 12874160-12874656 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y37D8A.9a.1 12871029 12874656 -1

1 Sequence

Length
1499

1 Sequence Ontology Term

Identifier Name Description
transcript