WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.3c.1 Sequence Name  Y39E4B.3c.1
Length (nt)  1292   Chromosome Location  III: 13090393-13099461
Chromosome . Primary Identifier  III Chromosome Location . Start  13090393
Chromosome Location . End  13099461 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004164 pqn-83 Y39E4B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.3c Y39E4B.3c 915   III: 13090764-13090967

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.3c.1 13090393 13099461 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108354   575   III: 13090393-13090967 Caenorhabditis elegans
Exon108363   117   III: 13093882-13093998 Caenorhabditis elegans
Exon108366   241   III: 13096676-13096916 Caenorhabditis elegans
Exon108369   359   III: 13099103-13099461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.3c.1 13090393 13099461 -1

1 Sequence

Length
1292

1 Sequence Ontology Term

Identifier Name Description
transcript