WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39E4B.9c Sequence Name  Y39E4B.9c
Length (nt)  1203   Chromosome Location  III: 13134014-13134166
Chromosome . Primary Identifier  III Chromosome Location . Start  13134014
Chromosome Location . End  13134166
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.9c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43685 BRE-2, isoform c 46.1 400 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056251
WBRNAi00006871
WBRNAi00036951
WBRNAi00091463
WBRNAi00117471

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.9c 13134014 13134166 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000267 bre-2 Y39E4B.9 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39E4B.9c 13134014 13134166 -1
CDS:Y39E4B.9c 13134660 13134749 -1
CDS:Y39E4B.9c 13135099 13135231 -1
CDS:Y39E4B.9c 13135276 13135478 -1
CDS:Y39E4B.9c 13136218 13136570 -1
CDS:Y39E4B.9c 13137042 13137107 -1
CDS:Y39E4B.9c 13137151 13137239 -1
CDS:Y39E4B.9c 13137957 13137999 -1
CDS:Y39E4B.9c 13139542 13139614 -1

1 Sequence

Length
1203

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39E4B.9c.1 Y39E4B.9c.1 1203   III: 13134014-13139614