WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A8.1b.1 Sequence Name  F56A8.1b.1
Length (nt)  2618   Chromosome Location  III: 13246565-13253697
Chromosome . Primary Identifier  III Chromosome Location . Start  13246565
Chromosome Location . End  13253697 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010138 anoh-1 F56A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A8.1b F56A8.1b 2523   III: 13246578-13246610

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.1b.1 13246565 13253697 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108589   46   III: 13246565-13246610 Caenorhabditis elegans
Exon108590   279   III: 13247938-13248216 Caenorhabditis elegans
Exon108593   180   III: 13248276-13248455 Caenorhabditis elegans
Exon108595   186   III: 13249025-13249210 Caenorhabditis elegans
Exon108597   110   III: 13249254-13249363 Caenorhabditis elegans
Exon108599   150   III: 13250122-13250271 Caenorhabditis elegans
Exon108601   90   III: 13250321-13250410 Caenorhabditis elegans
Exon108603   217   III: 13250474-13250690 Caenorhabditis elegans
Exon108605   405   III: 13251077-13251481 Caenorhabditis elegans
Exon108607   149   III: 13251967-13252115 Caenorhabditis elegans
Exon108609   96   III: 13252167-13252262 Caenorhabditis elegans
Exon108611   79   III: 13252312-13252390 Caenorhabditis elegans
Exon108613   124   III: 13252437-13252560 Caenorhabditis elegans
Exon108615   69   III: 13253044-13253112 Caenorhabditis elegans
Exon108617   92   III: 13253160-13253251 Caenorhabditis elegans
Exon108619   81   III: 13253300-13253380 Caenorhabditis elegans
Exon108620   265   III: 13253433-13253697 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.1b.1 13246565 13253697 1

1 Sequence

Length
2618

1 Sequence Ontology Term

Identifier Name Description
transcript