WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A8.1a.1 Sequence Name  F56A8.1a.1
Length (nt)  2555   Chromosome Location  III: 13247959-13253701
Chromosome . Primary Identifier  III Chromosome Location . Start  13247959
Chromosome Location . End  13253701 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010138 anoh-1 F56A8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A8.1a F56A8.1a 2469   III: 13247959-13248216

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.1a.1 13247959 13253701 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108591   258   III: 13247959-13248216 Caenorhabditis elegans
Exon108592   180   III: 13248276-13248455 Caenorhabditis elegans
Exon108594   186   III: 13249025-13249210 Caenorhabditis elegans
Exon108596   110   III: 13249254-13249363 Caenorhabditis elegans
Exon108598   150   III: 13250122-13250271 Caenorhabditis elegans
Exon108600   90   III: 13250321-13250410 Caenorhabditis elegans
Exon108602   217   III: 13250474-13250690 Caenorhabditis elegans
Exon108604   405   III: 13251077-13251481 Caenorhabditis elegans
Exon108606   149   III: 13251967-13252115 Caenorhabditis elegans
Exon108608   96   III: 13252167-13252262 Caenorhabditis elegans
Exon108610   79   III: 13252312-13252390 Caenorhabditis elegans
Exon108612   124   III: 13252437-13252560 Caenorhabditis elegans
Exon108614   69   III: 13253044-13253112 Caenorhabditis elegans
Exon108616   92   III: 13253160-13253251 Caenorhabditis elegans
Exon108618   81   III: 13253300-13253380 Caenorhabditis elegans
Exon108621   269   III: 13253433-13253701 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F56A8.1a.1 13247959 13253701 1

1 Sequence

Length
2555

1 Sequence Ontology Term

Identifier Name Description
transcript