WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F45G2.2a Sequence Name  F45G2.2a
Length (nt)  3708   Chromosome Location  III: 13409943-13410014
Chromosome . Primary Identifier  III Chromosome Location . Start  13409943
Chromosome Location . End  13410014
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45G2.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28727 MYO-6, isoform a 143.1 1235 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00047435
WBRNAi00015040
WBRNAi00005994
WBRNAi00060102
WBRNAi00060103
WBRNAi00060104
WBRNAi00060105

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F45G2.2a 13409943 13410014 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009730 myo-6 F45G2.2 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:F45G2.2a 13409943 13410014 1
CDS:F45G2.2a 13410702 13410974 1
CDS:F45G2.2a 13411164 13411320 1
CDS:F45G2.2a 13411788 13411906 1
CDS:F45G2.2a 13411957 13412030 1
CDS:F45G2.2a 13412075 13412160 1
CDS:F45G2.2a 13412258 13412350 1
CDS:F45G2.2a 13412397 13412500 1
CDS:F45G2.2a 13412617 13412755 1
CDS:F45G2.2a 13412803 13412921 1
CDS:F45G2.2a 13412970 13413122 1
CDS:F45G2.2a 13413176 13413346 1
CDS:F45G2.2a 13413545 13414002 1
CDS:F45G2.2a 13414182 13414380 1
CDS:F45G2.2a 13414423 13414500 1
CDS:F45G2.2a 13420185 13420292 1
CDS:F45G2.2a 13420650 13420729 1
CDS:F45G2.2a 13420964 13421122 1
CDS:F45G2.2a 13421214 13421538 1
CDS:F45G2.2a 13422021 13422174 1
CDS:F45G2.2a 13422225 13422318 1
CDS:F45G2.2a 13422378 13422759 1
CDS:F45G2.2a 13423230 13423340 1

1 Sequence

Length
3708

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F45G2.2a.1 F45G2.2a.1 4047   III: 13409798-13423534