WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Hide

Oops!

http://intermine.wormbase.org/tools/wormmine/service/ is incorrect

mRNA :

WormMine ID  Transcript:F45G2.2b.2 Sequence Name  F45G2.2b.2
Length (nt)  3351   Chromosome Location  III: 13411786-13423483
Chromosome . Primary Identifier  III Chromosome Location . Start  13411786
Chromosome Location . End  13423483 Method  Coding_transcript
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45G2.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009730 myo-6 F45G2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45G2.2b F45G2.2b 1173   III: 13421016-13421122

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45G2.2b.2 13411786 13423483 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108961   121   III: 13411786-13411906 Caenorhabditis elegans
Exon108964   74   III: 13411957-13412030 Caenorhabditis elegans
Exon108966   86   III: 13412075-13412160 Caenorhabditis elegans
Exon108968   93   III: 13412258-13412350 Caenorhabditis elegans
Exon108970   104   III: 13412397-13412500 Caenorhabditis elegans
Exon108972   139   III: 13412617-13412755 Caenorhabditis elegans
Exon108974   119   III: 13412803-13412921 Caenorhabditis elegans
Exon108976   153   III: 13412970-13413122 Caenorhabditis elegans
Exon108978   171   III: 13413176-13413346 Caenorhabditis elegans
Exon108981   458   III: 13413545-13414002 Caenorhabditis elegans
Exon108983   199   III: 13414182-13414380 Caenorhabditis elegans
Exon108985   78   III: 13414423-13414500 Caenorhabditis elegans
Exon108988   108   III: 13420185-13420292 Caenorhabditis elegans
Exon108991   80   III: 13420650-13420729 Caenorhabditis elegans
Exon108996   159   III: 13420964-13421122 Caenorhabditis elegans
Exon109000   325   III: 13421214-13421538 Caenorhabditis elegans
Exon109004   154   III: 13422021-13422174 Caenorhabditis elegans
Exon109008   94   III: 13422225-13422318 Caenorhabditis elegans
Exon109012   382   III: 13422378-13422759 Caenorhabditis elegans
Exon109015   254   III: 13423230-13423483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45G2.2b.2 13411786 13423483 1

1 Sequence

Length
3351

1 Sequence Ontology Term

Identifier Name Description
transcript