WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45G2.2b.3 Sequence Name  F45G2.2b.3
Length (nt)  2298   Chromosome Location  III: 13419484-13423524
Chromosome . Primary Identifier  III Chromosome Location . Start  13419484
Chromosome Location . End  13423524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45G2.2b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009730 myo-6 F45G2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45G2.2b F45G2.2b 1173   III: 13421016-13421122

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45G2.2b.3 13419484 13423524 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108986   809   III: 13419484-13420292 Caenorhabditis elegans
Exon108992   80   III: 13420650-13420729 Caenorhabditis elegans
Exon108997   159   III: 13420964-13421122 Caenorhabditis elegans
Exon109001   325   III: 13421214-13421538 Caenorhabditis elegans
Exon109005   154   III: 13422021-13422174 Caenorhabditis elegans
Exon109009   94   III: 13422225-13422318 Caenorhabditis elegans
Exon109013   382   III: 13422378-13422759 Caenorhabditis elegans
Exon109016   295   III: 13423230-13423524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45G2.2b.3 13419484 13423524 1

1 Sequence

Length
2298

1 Sequence Ontology Term

Identifier Name Description
transcript