WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28A8.2.1 Sequence Name  T28A8.2.1
Length (nt)  1002   Chromosome Location  III: 13494046-13495671
Chromosome . Primary Identifier  III Chromosome Location . Start  13494046
Chromosome Location . End  13495671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28A8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012108 T28A8.2 T28A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28A8.2 T28A8.2 1002   III: 13494046-13494126

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28A8.2.1 13494046 13495671 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109232   81   III: 13494046-13494126 Caenorhabditis elegans
Exon109233   95   III: 13494170-13494264 Caenorhabditis elegans
Exon109234   82   III: 13494317-13494398 Caenorhabditis elegans
Exon109235   83   III: 13494451-13494533 Caenorhabditis elegans
Exon109236   101   III: 13494664-13494764 Caenorhabditis elegans
Exon109237   101   III: 13494808-13494908 Caenorhabditis elegans
Exon109238   126   III: 13495081-13495206 Caenorhabditis elegans
Exon109239   223   III: 13495253-13495475 Caenorhabditis elegans
Exon109240   43   III: 13495519-13495561 Caenorhabditis elegans
Exon109241   67   III: 13495605-13495671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28A8.2.1 13494046 13495671 -1

1 Sequence

Length
1002

1 Sequence Ontology Term

Identifier Name Description
transcript