WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y76A2B.1a Sequence Name  Y76A2B.1a
Length (nt)  3174   Chromosome Location  III: 13515425-13515517
Chromosome . Primary Identifier  III Chromosome Location . Start  13515425
Chromosome Location . End  13515517
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76A2B.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE19273 POD-1, isoform a 115.7 1057 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00009425
WBRNAi00085845
WBRNAi00027877
WBRNAi00078554
WBRNAi00091269
WBRNAi00058485
WBRNAi00058486
WBRNAi00026959
WBRNAi00113793
WBRNAi00115698

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y76A2B.1a 13515425 13515517 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004075 pod-1 Y76A2B.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y76A2B.1a 13515425 13515517 -1
CDS:Y76A2B.1a 13516705 13516934 -1
CDS:Y76A2B.1a 13517971 13518200 -1
CDS:Y76A2B.1a 13518248 13520160 -1
CDS:Y76A2B.1a 13520392 13520858 -1
CDS:Y76A2B.1a 13521227 13521404 -1
CDS:Y76A2B.1a 13524031 13524093 -1

1 Sequence

Length
3174

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y76A2B.1a.1 Y76A2B.1a.1 3671   III: 13514945-13524110