WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y76A2B.2.1 Sequence Name  Y76A2B.2.1
Length (nt)  2438   Chromosome Location  III: 13527438-13539975
Chromosome . Primary Identifier  III Chromosome Location . Start  13527438
Chromosome Location . End  13539975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76A2B.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013574 lron-13 Y76A2B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y76A2B.2 Y76A2B.2 2349   III: 13528531-13528649

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y76A2B.2.1 13527438 13539975 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109345   61   III: 13527438-13527498 Caenorhabditis elegans
Exon109348   124   III: 13528526-13528649 Caenorhabditis elegans
Exon109350   88   III: 13531079-13531166 Caenorhabditis elegans
Exon109351   67   III: 13531212-13531278 Caenorhabditis elegans
Exon109352   71   III: 13531351-13531421 Caenorhabditis elegans
Exon109354   62   III: 13537328-13537389 Caenorhabditis elegans
Exon109355   369   III: 13537665-13538033 Caenorhabditis elegans
Exon109356   109   III: 13538257-13538365 Caenorhabditis elegans
Exon109357   465   III: 13538411-13538875 Caenorhabditis elegans
Exon109358   1022   III: 13538954-13539975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y76A2B.2.1 13527438 13539975 1

1 Sequence

Length
2438

1 Sequence Ontology Term

Identifier Name Description
transcript