WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1AA.9 Sequence Name  Y38C1AA.9
Length (nt)  525   Chromosome Location  IV: 156139-156257
Chromosome . Primary Identifier  IV Chromosome Location . Start  156139
Chromosome Location . End  156257
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25243 GEGF-1 19.1 174 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055991
WBRNAi00036826
WBRNAi00070197

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AA.9 156139 156257 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021400 gegf-1 Y38C1AA.9 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38C1AA.9 156139 156257 -1
CDS:Y38C1AA.9 156359 156539 -1
CDS:Y38C1AA.9 157071 157159 -1
CDS:Y38C1AA.9 157755 157890 -1

1 Sequence

Length
525

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1AA.9.1 Y38C1AA.9.1 617   IV: 156066-157909