WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R02D3.2.1 Sequence Name  R02D3.2.1
Length (nt)  2596   Chromosome Location  IV: 240451-244130
Chromosome . Primary Identifier  IV Chromosome Location . Start  240451
Chromosome Location . End  244130 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R02D3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019820 cogc-8 R02D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R02D3.2 R02D3.2 2232   IV: 240589-240652

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.2.1 240451 244130 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110625   202   IV: 240451-240652 Caenorhabditis elegans
Exon110626   125   IV: 240699-240823 Caenorhabditis elegans
Exon110627   171   IV: 240874-241044 Caenorhabditis elegans
Exon110628   111   IV: 241096-241206 Caenorhabditis elegans
Exon110629   204   IV: 241256-241459 Caenorhabditis elegans
Exon110630   111   IV: 241513-241623 Caenorhabditis elegans
Exon110631   119   IV: 241707-241825 Caenorhabditis elegans
Exon110632   556   IV: 241954-242509 Caenorhabditis elegans
Exon110633   997   IV: 243134-244130 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R02D3.2.1 240451 244130 1

1 Sequence

Length
2596

1 Sequence Ontology Term

Identifier Name Description
transcript