WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2i.1 Sequence Name  Y66H1B.2i.1
Length (nt)  7121   Chromosome Location  IV: 359237-376012
Chromosome . Primary Identifier  IV Chromosome Location . Start  359237
Chromosome Location . End  376012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2i Y66H1B.2i 6774   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2i.1 359237 376012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111061   383   IV: 359237-359619 Caenorhabditis elegans
Exon111080   228   IV: 359994-360221 Caenorhabditis elegans
Exon111097   161   IV: 360805-360965 Caenorhabditis elegans
Exon111114   254   IV: 361011-361264 Caenorhabditis elegans
Exon111131   533   IV: 361326-361858 Caenorhabditis elegans
Exon111148   852   IV: 361907-362758 Caenorhabditis elegans
Exon111165   395   IV: 362837-363231 Caenorhabditis elegans
Exon111180   103   IV: 363771-363873 Caenorhabditis elegans
Exon111196   153   IV: 363976-364128 Caenorhabditis elegans
Exon111206   99   IV: 364209-364307 Caenorhabditis elegans
Exon111222   581   IV: 367129-367709 Caenorhabditis elegans
Exon111238   186   IV: 367761-367946 Caenorhabditis elegans
Exon111254   159   IV: 368242-368400 Caenorhabditis elegans
Exon111270   172   IV: 368599-368770 Caenorhabditis elegans
Exon111286   329   IV: 368820-369148 Caenorhabditis elegans
Exon111304   100   IV: 371406-371505 Caenorhabditis elegans
Exon111321   555   IV: 371573-372127 Caenorhabditis elegans
Exon111338   536   IV: 372808-373343 Caenorhabditis elegans
Exon111356   277   IV: 373644-373920 Caenorhabditis elegans
Exon111377   569   IV: 373962-374530 Caenorhabditis elegans
Exon111398   174   IV: 374571-374744 Caenorhabditis elegans
Exon111407   172   IV: 375594-375765 Caenorhabditis elegans
Exon111416   114   IV: 375814-375927 Caenorhabditis elegans
Exon111424   36   IV: 375977-376012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2i.1 359237 376012 -1

1 Sequence

Length
7121

1 Sequence Ontology Term

Identifier Name Description
transcript