WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2n.1 Sequence Name  Y66H1B.2n.1
Length (nt)  6213   Chromosome Location  IV: 359584-374664
Chromosome . Primary Identifier  IV Chromosome Location . Start  359584
Chromosome Location . End  374664 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2n Y66H1B.2n 6213   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2n.1 359584 374664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111066   36   IV: 359584-359619 Caenorhabditis elegans
Exon111085   228   IV: 359994-360221 Caenorhabditis elegans
Exon111102   161   IV: 360805-360965 Caenorhabditis elegans
Exon111119   254   IV: 361011-361264 Caenorhabditis elegans
Exon111136   533   IV: 361326-361858 Caenorhabditis elegans
Exon111153   852   IV: 361907-362758 Caenorhabditis elegans
Exon111170   395   IV: 362837-363231 Caenorhabditis elegans
Exon111183   103   IV: 363771-363873 Caenorhabditis elegans
Exon111211   99   IV: 364209-364307 Caenorhabditis elegans
Exon111227   581   IV: 367129-367709 Caenorhabditis elegans
Exon111243   186   IV: 367761-367946 Caenorhabditis elegans
Exon111259   159   IV: 368242-368400 Caenorhabditis elegans
Exon111275   172   IV: 368599-368770 Caenorhabditis elegans
Exon111291   329   IV: 368820-369148 Caenorhabditis elegans
Exon111309   100   IV: 371406-371505 Caenorhabditis elegans
Exon111326   555   IV: 371573-372127 Caenorhabditis elegans
Exon111343   536   IV: 372808-373343 Caenorhabditis elegans
Exon111361   277   IV: 373644-373920 Caenorhabditis elegans
Exon111374   563   IV: 373962-374524 Caenorhabditis elegans
Exon111386   94   IV: 374571-374664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2n.1 359584 374664 -1

1 Sequence

Length
6213

1 Sequence Ontology Term

Identifier Name Description
transcript