WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2q.1 Sequence Name  Y66H1B.2q.1
Length (nt)  6372   Chromosome Location  IV: 359584-374664
Chromosome . Primary Identifier  IV Chromosome Location . Start  359584
Chromosome Location . End  374664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2q.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2q Y66H1B.2q 6372   IV: 359584-359619

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2q.1 359584 374664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111069   36   IV: 359584-359619 Caenorhabditis elegans
Exon111088   228   IV: 359994-360221 Caenorhabditis elegans
Exon111105   161   IV: 360805-360965 Caenorhabditis elegans
Exon111122   254   IV: 361011-361264 Caenorhabditis elegans
Exon111139   533   IV: 361326-361858 Caenorhabditis elegans
Exon111156   852   IV: 361907-362758 Caenorhabditis elegans
Exon111173   395   IV: 362837-363231 Caenorhabditis elegans
Exon111184   103   IV: 363771-363873 Caenorhabditis elegans
Exon111200   153   IV: 363976-364128 Caenorhabditis elegans
Exon111214   99   IV: 364209-364307 Caenorhabditis elegans
Exon111230   581   IV: 367129-367709 Caenorhabditis elegans
Exon111246   186   IV: 367761-367946 Caenorhabditis elegans
Exon111262   159   IV: 368242-368400 Caenorhabditis elegans
Exon111278   172   IV: 368599-368770 Caenorhabditis elegans
Exon111294   329   IV: 368820-369148 Caenorhabditis elegans
Exon111312   100   IV: 371406-371505 Caenorhabditis elegans
Exon111329   555   IV: 371573-372127 Caenorhabditis elegans
Exon111346   536   IV: 372808-373343 Caenorhabditis elegans
Exon111364   277   IV: 373644-373920 Caenorhabditis elegans
Exon111381   569   IV: 373962-374530 Caenorhabditis elegans
Exon111389   94   IV: 374571-374664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2q.1 359584 374664 -1

1 Sequence

Length
6372

1 Sequence Ontology Term

Identifier Name Description
transcript