WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y66H1B.2b.1 Sequence Name  Y66H1B.2b.1
Length (nt)  3389   Chromosome Location  IV: 370229-376012
Chromosome . Primary Identifier  IV Chromosome Location . Start  370229
Chromosome Location . End  376012 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y66H1B.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022048 fln-1 Y66H1B.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y66H1B.2b Y66H1B.2b 3255   IV: 370363-371090

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2b.1 370229 376012 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111298   862   IV: 370229-371090 Caenorhabditis elegans
Exon111300   100   IV: 371406-371505 Caenorhabditis elegans
Exon111317   555   IV: 371573-372127 Caenorhabditis elegans
Exon111334   536   IV: 372808-373343 Caenorhabditis elegans
Exon111352   277   IV: 373644-373920 Caenorhabditis elegans
Exon111369   563   IV: 373962-374524 Caenorhabditis elegans
Exon111394   174   IV: 374571-374744 Caenorhabditis elegans
Exon111403   172   IV: 375594-375765 Caenorhabditis elegans
Exon111412   114   IV: 375814-375927 Caenorhabditis elegans
Exon111421   36   IV: 375977-376012 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y66H1B.2b.1 370229 376012 -1

1 Sequence

Length
3389

1 Sequence Ontology Term

Identifier Name Description
transcript