WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03G1.7a.1 Sequence Name  W03G1.7a.1
Length (nt)  1912   Chromosome Location  IV: 520214-523809
Chromosome . Primary Identifier  IV Chromosome Location . Start  520214
Chromosome Location . End  523809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G1.7a W03G1.7a 1770   IV: 520286-520508

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.7a.1 520214 523809 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111779   295   IV: 520214-520508 Caenorhabditis elegans
Exon111781   191   IV: 520557-520747 Caenorhabditis elegans
Exon111783   97   IV: 520794-520890 Caenorhabditis elegans
Exon111785   102   IV: 520936-521037 Caenorhabditis elegans
Exon111787   171   IV: 521090-521260 Caenorhabditis elegans
Exon111789   81   IV: 521798-521878 Caenorhabditis elegans
Exon111791   111   IV: 521931-522041 Caenorhabditis elegans
Exon111793   293   IV: 522090-522382 Caenorhabditis elegans
Exon111795   123   IV: 522756-522878 Caenorhabditis elegans
Exon111797   92   IV: 523034-523125 Caenorhabditis elegans
Exon111800   73   IV: 523341-523413 Caenorhabditis elegans
Exon111803   173   IV: 523473-523645 Caenorhabditis elegans
Exon111804   110   IV: 523700-523809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03G1.7a.1 520214 523809 -1

1 Sequence

Length
1912

1 Sequence Ontology Term

Identifier Name Description
transcript