WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53H1.3a Sequence Name  F53H1.3a
Length (nt)  1665   Chromosome Location  IV: 1329163-1329258
Chromosome . Primary Identifier  IV Chromosome Location . Start  1329163
Chromosome Location . End  1329258
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H1.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31538 F53H1.3, isoform a 63.2 554 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00048185
WBRNAi00048186
WBRNAi00015543
WBRNAi00015997
WBRNAi00032718
WBRNAi00079019
WBRNAi00079017
WBRNAi00079018

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53H1.3a 1329163 1329258 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018777 F53H1.3 F53H1.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53H1.3a 1329163 1329258 1
CDS:F53H1.3a 1329445 1329566 1
CDS:F53H1.3a 1329859 1330003 1
CDS:F53H1.3a 1331457 1331562 1
CDS:F53H1.3a 1331617 1331756 1
CDS:F53H1.3a 1332846 1333111 1
CDS:F53H1.3a 1334340 1334462 1
CDS:F53H1.3a 1335188 1335311 1
CDS:F53H1.3a 1335374 1335490 1
CDS:F53H1.3a 1338382 1338484 1
CDS:F53H1.3a 1338850 1338969 1
CDS:F53H1.3a 1339026 1339228 1

1 Sequence

Length
1665

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53H1.3a.1 F53H1.3a.1 1814   IV: 1329162-1339376