WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y77E11A.11a Sequence Name  Y77E11A.11a
Length (nt)  2337   Chromosome Location  IV: 1435627-1435639
Chromosome . Primary Identifier  IV Chromosome Location . Start  1435627
Chromosome Location . End  1435639
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y77E11A.11a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48001 CLP-7, isoform a 86.3 778 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00058507
WBRNAi00021483
WBRNAi00021490
WBRNAi00021491
WBRNAi00021492
WBRNAi00022745
WBRNAi00022746
WBRNAi00022747
WBRNAi00037871
WBRNAi00091838
WBRNAi00091839
WBRNAi00091804
WBRNAi00091803
WBRNAi00091808
WBRNAi00091809
WBRNAi00091814
WBRNAi00091813
WBRNAi00091818
WBRNAi00091819
WBRNAi00091824
WBRNAi00091823
WBRNAi00091828
WBRNAi00091829
WBRNAi00091834
WBRNAi00091833

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y77E11A.11a 1435627 1435639 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000547 clp-7 Y77E11A.11 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y77E11A.11a 1435627 1435639 -1
CDS:Y77E11A.11a 1436948 1437411 -1
CDS:Y77E11A.11a 1437924 1438175 -1
CDS:Y77E11A.11a 1438227 1438494 -1
CDS:Y77E11A.11a 1442345 1442732 -1
CDS:Y77E11A.11a 1443875 1444327 -1
CDS:Y77E11A.11a 1444994 1445209 -1
CDS:Y77E11A.11a 1445684 1445966 -1

1 Sequence

Length
2337

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y77E11A.11a.1 Y77E11A.11a.1 2499   IV: 1435465-1445966