WormMine: Gene WBGene00220213

• WormBase Gene ID: WBGene00220213
• Gene Name: Y77E11A.21
• Sequence Name: Y77E11A.21
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by dpy-21 based on RNA-seq studies.
• Biotype: SO:0001267
• Genetic Position: :±
• Length (nt): 94

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00220213

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y77E11A.21	Y77E11A.21	94	IV: 1465620-1465713

Other

0 CDSs

2 RNAi Result

• WBRNAi00058508
• WBRNAi00021487

8 Allele

• gk963722
• gk964482
• gk963025
• WBVar01913389
• gk425838
• gk370018
• WBVar00568805
• WBVar01725233

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00220213
• Start: 1465620
• End: 1465713
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage.	DESeq v1.6.3. Fold change > 1.5.	WBPaper00050370:dpy-21(e428)_L3_upregulated
Bacteria infection: Pseudomonas aeruginosa PA14. 24 hours of exposure.	Small RNAs (21-26nt) that showed significantly decreased expression after L4 animals were exposed to P .aeruginosa strain PA14 for 24 hours.	DESeq2, FDR < 0.05	WBPaper00056868:P.aeruginosa_downregulated_smallRNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00220213
• Start: 1465620
• End: 1465713
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 94

1 Sequence Ontology Term