WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41D4B.8.1 Sequence Name  Y41D4B.8.1
Length (nt)  1196   Chromosome Location  IV: 1620094-1623753
Chromosome . Primary Identifier  IV Chromosome Location . Start  1620094
Chromosome Location . End  1623753 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41D4B.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003682 nhr-92 Y41D4B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41D4B.8 Y41D4B.8 1065   IV: 1620199-1620266

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4B.8.1 1620094 1623753 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113762   173   IV: 1620094-1620266 Caenorhabditis elegans
Exon113763   86   IV: 1620321-1620406 Caenorhabditis elegans
Exon113764   353   IV: 1621166-1621518 Caenorhabditis elegans
Exon113765   185   IV: 1622012-1622196 Caenorhabditis elegans
Exon113766   271   IV: 1622243-1622513 Caenorhabditis elegans
Exon113767   128   IV: 1623626-1623753 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4B.8.1 1620094 1623753 1

1 Sequence

Length
1196

1 Sequence Ontology Term

Identifier Name Description
transcript