WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A8.2a.1 Sequence Name  F55A8.2a.1
Length (nt)  3000   Chromosome Location  IV: 1848071-1880596
Chromosome . Primary Identifier  IV Chromosome Location . Start  1848071
Chromosome Location . End  1880596 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001173 egl-4 F55A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A8.2a F55A8.2a 2343   IV: 1848071-1848226

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55A8.2a.1 1848071 1880596 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114062   156   IV: 1848071-1848226 Caenorhabditis elegans
Exon114067   168   IV: 1860836-1861003 Caenorhabditis elegans
Exon114073   236   IV: 1862683-1862918 Caenorhabditis elegans
Exon114079   167   IV: 1864120-1864286 Caenorhabditis elegans
Exon114085   97   IV: 1865373-1865469 Caenorhabditis elegans
Exon114092   124   IV: 1871764-1871887 Caenorhabditis elegans
Exon114101   108   IV: 1873585-1873692 Caenorhabditis elegans
Exon114111   557   IV: 1875651-1876207 Caenorhabditis elegans
Exon114118   634   IV: 1877187-1877820 Caenorhabditis elegans
Exon114134   753   IV: 1879844-1880596 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55A8.2a.1 1848071 1880596 1

1 Sequence

Length
3000

1 Sequence Ontology Term

Identifier Name Description
transcript