WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y76B12C.6b.1 Sequence Name  Y76B12C.6b.1
Length (nt)  2545   Chromosome Location  IV: 1981404-1993064
Chromosome . Primary Identifier  IV Chromosome Location . Start  1981404
Chromosome Location . End  1993064 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76B12C.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022300 Y76B12C.6 Y76B12C.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y76B12C.6b Y76B12C.6b 1665   IV: 1981446-1981464

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y76B12C.6b.1 1981404 1993064 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114391   61   IV: 1981404-1981464 Caenorhabditis elegans
Exon114393   109   IV: 1981517-1981625 Caenorhabditis elegans
Exon114397   470   IV: 1986268-1986737 Caenorhabditis elegans
Exon114399   208   IV: 1989259-1989466 Caenorhabditis elegans
Exon114400   805   IV: 1990550-1991354 Caenorhabditis elegans
Exon114403   892   IV: 1992173-1993064 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y76B12C.6b.1 1981404 1993064 1

1 Sequence

Length
2545

1 Sequence Ontology Term

Identifier Name Description
transcript