WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y76B12C.7b Sequence Name  Y76B12C.7b
Length (nt)  3792   Chromosome Location  IV: 2009154-2009208
Chromosome . Primary Identifier  IV Chromosome Location . Start  2009154
Chromosome Location . End  2009208
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76B12C.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48903 CPSF-1, isoform b 140.7 1263 Caenorhabditis elegans
 

Other

37 RNAi

WormBase ID
WBRNAi00009426
WBRNAi00073855
WBRNAi00073856
WBRNAi00073857
WBRNAi00073858
WBRNAi00073859
WBRNAi00073860
WBRNAi00073861
WBRNAi00073862
WBRNAi00058501
WBRNAi00099965
WBRNAi00085789
WBRNAi00072782
WBRNAi00100513
WBRNAi00002316
WBRNAi00037869
WBRNAi00021470
WBRNAi00081950
WBRNAi00100887
WBRNAi00099359
WBRNAi00099763
WBRNAi00099561
WBRNAi00101153
WBRNAi00026960
WBRNAi00072781
WBRNAi00072780
WBRNAi00083661
WBRNAi00083759
WBRNAi00114513
WBRNAi00106609

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y76B12C.7b 2009154 2009208 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022301 cpsf-1 Y76B12C.7 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y76B12C.7b 2009154 2009208 -1
CDS:Y76B12C.7b 2010399 2010738 -1
CDS:Y76B12C.7b 2013054 2013774 -1
CDS:Y76B12C.7b 2015249 2015564 -1
CDS:Y76B12C.7b 2017577 2017746 -1
CDS:Y76B12C.7b 2019244 2019428 -1
CDS:Y76B12C.7b 2020863 2021132 -1
CDS:Y76B12C.7b 2022574 2022693 -1
CDS:Y76B12C.7b 2023338 2023806 -1
CDS:Y76B12C.7b 2025632 2025913 -1
CDS:Y76B12C.7b 2027471 2027847 -1
CDS:Y76B12C.7b 2029046 2029458 -1
CDS:Y76B12C.7b 2030152 2030225 -1

1 Sequence

Length
3792

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y76B12C.7b.1 Y76B12C.7b.1 3792   IV: 2009154-2030225