WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23H5.7.1 Sequence Name  C23H5.7.1
Length (nt)  1968   Chromosome Location  IV: 2104056-2111408
Chromosome . Primary Identifier  IV Chromosome Location . Start  2104056
Chromosome Location . End  2111408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23H5.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000487 che-6 C23H5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23H5.7 C23H5.7 1968   IV: 2104056-2104175

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C23H5.7.1 2104056 2111408 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114526   120   IV: 2104056-2104175 Caenorhabditis elegans
Exon114527   96   IV: 2104489-2104584 Caenorhabditis elegans
Exon114528   95   IV: 2104636-2104730 Caenorhabditis elegans
Exon114529   442   IV: 2105725-2106166 Caenorhabditis elegans
Exon114530   82   IV: 2107314-2107395 Caenorhabditis elegans
Exon114531   88   IV: 2107444-2107531 Caenorhabditis elegans
Exon114532   176   IV: 2107580-2107755 Caenorhabditis elegans
Exon114533   110   IV: 2108296-2108405 Caenorhabditis elegans
Exon114534   221   IV: 2108654-2108874 Caenorhabditis elegans
Exon114535   168   IV: 2109697-2109864 Caenorhabditis elegans
Exon114536   209   IV: 2110575-2110783 Caenorhabditis elegans
Exon114537   98   IV: 2111196-2111293 Caenorhabditis elegans
Exon114538   63   IV: 2111346-2111408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C23H5.7.1 2104056 2111408 -1

1 Sequence

Length
1968

1 Sequence Ontology Term

Identifier Name Description
transcript