WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.2d.2 Sequence Name  Y69A2AR.2d.2
Length (nt)  2322   Chromosome Location  IV: 2642973-2650105
Chromosome . Primary Identifier  IV Chromosome Location . Start  2642973
Chromosome Location . End  2650105 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.2d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004367 ric-8 Y69A2AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.2d Y69A2AR.2d 846   IV: 2645472-2645771

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.2d.2 2642973 2650105 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115386   152   IV: 2642973-2643124 Caenorhabditis elegans
Exon115391   109   IV: 2643167-2643275 Caenorhabditis elegans
Exon115399   85   IV: 2643361-2643445 Caenorhabditis elegans
Exon115404   70   IV: 2643504-2643573 Caenorhabditis elegans
Exon115408   178   IV: 2643763-2643940 Caenorhabditis elegans
Exon115412   171   IV: 2644414-2644584 Caenorhabditis elegans
Exon115415   411   IV: 2645361-2645771 Caenorhabditis elegans
Exon115418   148   IV: 2647114-2647261 Caenorhabditis elegans
Exon115421   145   IV: 2648546-2648690 Caenorhabditis elegans
Exon115424   128   IV: 2648742-2648869 Caenorhabditis elegans
Exon115426   725   IV: 2649381-2650105 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.2d.2 2642973 2650105 1

1 Sequence

Length
2322

1 Sequence Ontology Term

Identifier Name Description
transcript