WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.2d.1 Sequence Name  Y69A2AR.2d.1
Length (nt)  2310   Chromosome Location  IV: 2642977-2650104
Chromosome . Primary Identifier  IV Chromosome Location . Start  2642977
Chromosome Location . End  2650104 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004367 ric-8 Y69A2AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.2d Y69A2AR.2d 846   IV: 2645472-2645771

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.2d.1 2642977 2650104 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115387   148   IV: 2642977-2643124 Caenorhabditis elegans
Exon115395   102   IV: 2643174-2643275 Caenorhabditis elegans
Exon115398   85   IV: 2643361-2643445 Caenorhabditis elegans
Exon115403   70   IV: 2643504-2643573 Caenorhabditis elegans
Exon115407   178   IV: 2643763-2643940 Caenorhabditis elegans
Exon115411   171   IV: 2644414-2644584 Caenorhabditis elegans
Exon115414   411   IV: 2645361-2645771 Caenorhabditis elegans
Exon115417   148   IV: 2647114-2647261 Caenorhabditis elegans
Exon115420   145   IV: 2648546-2648690 Caenorhabditis elegans
Exon115423   128   IV: 2648742-2648869 Caenorhabditis elegans
Exon115425   724   IV: 2649381-2650104 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.2d.1 2642977 2650104 1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
transcript