WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8C.5c.1 Sequence Name  Y67D8C.5c.1
Length (nt)  13047   Chromosome Location  IV: 3032758-3050040
Chromosome . Primary Identifier  IV Chromosome Location . Start  3032758
Chromosome Location . End  3050040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8C.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022069 eel-1 Y67D8C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8C.5c Y67D8C.5c 12543   IV: 3033193-3033295

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5c.1 3032758 3050040 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116131   538   IV: 3032758-3033295 Caenorhabditis elegans
Exon116138   107   IV: 3033922-3034028 Caenorhabditis elegans
Exon116146   892   IV: 3034088-3034979 Caenorhabditis elegans
Exon116154   1652   IV: 3035031-3036682 Caenorhabditis elegans
Exon116162   260   IV: 3037227-3037486 Caenorhabditis elegans
Exon116170   1336   IV: 3037894-3039229 Caenorhabditis elegans
Exon116180   406   IV: 3039695-3040100 Caenorhabditis elegans
Exon116186   2322   IV: 3040498-3042819 Caenorhabditis elegans
Exon116194   1037   IV: 3042876-3043912 Caenorhabditis elegans
Exon116202   1563   IV: 3044133-3045695 Caenorhabditis elegans
Exon116210   873   IV: 3045755-3046627 Caenorhabditis elegans
Exon116218   585   IV: 3046686-3047270 Caenorhabditis elegans
Exon116225   768   IV: 3048190-3048957 Caenorhabditis elegans
Exon116234   411   IV: 3049283-3049693 Caenorhabditis elegans
Exon116246   297   IV: 3049744-3050040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8C.5c.1 3032758 3050040 -1

1 Sequence

Length
13047

1 Sequence Ontology Term

Identifier Name Description
transcript