WormMine: Gene WBGene00200723

• WormBase Gene ID: WBGene00200723
• Gene Name: T23E1.6
• Sequence Name: T23E1.6
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in neurons and sensory neurons based on RNA-seq studies. Is affected by dlc-1 and pmt-2 based on RNA-seq and microarray studies. Is affected by Oligosaccharides based on microarray studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 150

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00200723

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:T23E1.6	T23E1.6	150	IV: 3168800-3168949

Other

0 CDSs

0 RNAi Result

9 Allele

• gk963722
• gk962726
• WBVar02121992
• WBVar02120496
• WBVar02123508
• WBVar02123920
• gk480970
• gk885419
• gk963648

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00200723
• Start: 3168800
• End: 3168949
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrIV_3168950..3169945
• Length (nt): 996
• Chromosome Location: IV: 3168950-3169945
• Organism: Caenorhabditis elegans

5 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology.	DESEQ2, fold change > 2 and FDR < 0.01.	WBPaper00062103:neuron_enriched
	Transcripts that showed significantly increased expression after four-day-old young adult worms were placed on NGM plates seeded with OP50 in the presence 5% Agaro-oligosaccharides(AGO) for 24 h, comparing to animals grown in the absence of AGO.	Fold change > 2.	WBPaper00064306:Agaro-oligosaccharides_upregulated
	Transcripts that showed significantly increased expression in pmt-2(RNAi) animals comparing to control animals iinjected with empty vector.	Fold-change > 1.5, ANOVA P values < 0.05.	WBPaper00055482:pmt-2(RNAi)_upregulated
	Transcripts that interact with 3xFLAG-DLC-1 as identified by immunoprecipitation followed by RNA sequencing.	DESeq2, fold change > 2,, p-value < 0.01	WBPaper00055334:DLC-1_interacting
	Transcripts that showed significantly increased expression in sensory neuron (labeled by iaIs25[Pgcy-37::GFP + unc-119(+)]) comparing to in whole worm.	Fold change > 2, p-value < 0.05.	WBPaper00060661:sensory-neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00200723
• Start: 3168800
• End: 3168949
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 150

1 Sequence Ontology Term