WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8A.2b.1 Sequence Name  Y67D8A.2b.1
Length (nt)  3961   Chromosome Location  IV: 3222440-3252604
Chromosome . Primary Identifier  IV Chromosome Location . Start  3222440
Chromosome Location . End  3252604 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8A.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022059 Y67D8A.2 Y67D8A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8A.2b Y67D8A.2b 3717   IV: 3222444-3222612

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8A.2b.1 3222440 3252604 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116553   173   IV: 3222440-3222612 Caenorhabditis elegans
Exon116558   136   IV: 3223190-3223325 Caenorhabditis elegans
Exon116561   100   IV: 3223376-3223475 Caenorhabditis elegans
Exon116564   322   IV: 3224483-3224804 Caenorhabditis elegans
Exon116567   277   IV: 3225608-3225884 Caenorhabditis elegans
Exon116569   131   IV: 3229975-3230105 Caenorhabditis elegans
Exon116571   338   IV: 3230394-3230731 Caenorhabditis elegans
Exon116573   150   IV: 3231454-3231603 Caenorhabditis elegans
Exon116581   189   IV: 3235514-3235702 Caenorhabditis elegans
Exon116583   174   IV: 3236800-3236973 Caenorhabditis elegans
Exon116587   156   IV: 3238070-3238225 Caenorhabditis elegans
Exon116593   136   IV: 3239074-3239209 Caenorhabditis elegans
Exon116601   480   IV: 3239970-3240449 Caenorhabditis elegans
Exon116608   60   IV: 3241557-3241616 Caenorhabditis elegans
Exon116613   91   IV: 3243455-3243545 Caenorhabditis elegans
Exon116622   238   IV: 3245475-3245712 Caenorhabditis elegans
Exon116632   78   IV: 3247843-3247920 Caenorhabditis elegans
Exon116642   126   IV: 3247967-3248092 Caenorhabditis elegans
Exon116660   376   IV: 3251614-3251989 Caenorhabditis elegans
Exon116663   230   IV: 3252375-3252604 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8A.2b.1 3222440 3252604 1

1 Sequence

Length
3961

1 Sequence Ontology Term

Identifier Name Description
transcript