WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67D8A.2e.1 Sequence Name  Y67D8A.2e.1
Length (nt)  1854   Chromosome Location  IV: 3236851-3251979
Chromosome . Primary Identifier  IV Chromosome Location . Start  3236851
Chromosome Location . End  3251979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67D8A.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022059 Y67D8A.2 Y67D8A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67D8A.2e Y67D8A.2e 1854   IV: 3236851-3236973

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8A.2e.1 3236851 3251979 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon116585   123   IV: 3236851-3236973 Caenorhabditis elegans
Exon116589   156   IV: 3238070-3238225 Caenorhabditis elegans
Exon116595   136   IV: 3239074-3239209 Caenorhabditis elegans
Exon116603   480   IV: 3239970-3240449 Caenorhabditis elegans
Exon116609   60   IV: 3241557-3241616 Caenorhabditis elegans
Exon116615   91   IV: 3243455-3243545 Caenorhabditis elegans
Exon116624   238   IV: 3245475-3245712 Caenorhabditis elegans
Exon116634   78   IV: 3247843-3247920 Caenorhabditis elegans
Exon116644   126   IV: 3247967-3248092 Caenorhabditis elegans
Exon116652   366   IV: 3251614-3251979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67D8A.2e.1 3236851 3251979 1

1 Sequence

Length
1854

1 Sequence Ontology Term

Identifier Name Description
transcript