WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0546.5 Sequence Name  B0546.5
Length (nt)  1038   Chromosome Location  IV: 3388050-3388288
Chromosome . Primary Identifier  IV Chromosome Location . Start  3388050
Chromosome Location . End  3388288
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0546.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48708 B0546.5 39.3 345 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00039185
WBRNAi00039186
WBRNAi00039187
WBRNAi00003400
WBRNAi00003589
WBRNAi00009850

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0546.5 3388050 3388288 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015252 B0546.5 B0546.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0546.5 3388050 3388288 -1
CDS:B0546.5 3388748 3388855 -1
CDS:B0546.5 3388908 3388998 -1
CDS:B0546.5 3389114 3389209 -1
CDS:B0546.5 3389320 3389415 -1
CDS:B0546.5 3389532 3389711 -1
CDS:B0546.5 3389860 3390087 -1

1 Sequence

Length
1038

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0546.5.1 B0546.5.1 1120   IV: 3387980-3390099