WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G12.16.1 Sequence Name  C09G12.16.1
Length (nt)  933   Chromosome Location  IV: 3480011-3481860
Chromosome . Primary Identifier  IV Chromosome Location . Start  3480011
Chromosome Location . End  3481860 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G12.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00023474 srz-37 C09G12.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G12.16 C09G12.16 933   IV: 3480011-3480244

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.16.1 3480011 3481860 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon117040   234   IV: 3480011-3480244 Caenorhabditis elegans
Exon117041   162   IV: 3480292-3480453 Caenorhabditis elegans
Exon117042   292   IV: 3480501-3480792 Caenorhabditis elegans
Exon117043   104   IV: 3481563-3481666 Caenorhabditis elegans
Exon117044   141   IV: 3481720-3481860 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G12.16.1 3480011 3481860 -1

1 Sequence

Length
933

1 Sequence Ontology Term

Identifier Name Description
transcript