WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46C8AL.2.1 Sequence Name  Y46C8AL.2.1
Length (nt)  1377   Chromosome Location  IV: 3940259-3941708
Chromosome . Primary Identifier  IV Chromosome Location . Start  3940259
Chromosome Location . End  3941708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46C8AL.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021580 clec-174 Y46C8AL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46C8AL.2 Y46C8AL.2 1371   IV: 3940259-3941412

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46C8AL.2.1 3940259 3941708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118035   1154   IV: 3940259-3941412 Caenorhabditis elegans
Exon118036   223   IV: 3941486-3941708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46C8AL.2.1 3940259 3941708 -1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript