WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K06B9.5b Sequence Name  K06B9.5b
Length (nt)  870   Chromosome Location  IV: 4199665-4199855
Chromosome . Primary Identifier  IV Chromosome Location . Start  4199665
Chromosome Location . End  4199855
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K06B9.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48918 PAX-2, isoform b 31.7 289 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00050052
WBRNAi00114718
WBRNAi00101786
WBRNAi00016675

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K06B9.5b 4199665 4199855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003938 pax-2 K06B9.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:K06B9.5b 4199665 4199855 -1
CDS:K06B9.5b 4199988 4200201 -1
CDS:K06B9.5b 4201447 4201512 -1
CDS:K06B9.5b 4201562 4201680 -1
CDS:K06B9.5b 4201860 4201924 -1
CDS:K06B9.5b 4202179 4202329 -1
CDS:K06B9.5b 4203341 4203404 -1

1 Sequence

Length
870

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K06B9.5b.1 K06B9.5b.1 870   IV: 4199665-4203404