WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F36A4.7 Sequence Name  F36A4.7
Length (nt)  5571   Chromosome Location  IV: 4248188-4248271
Chromosome . Primary Identifier  IV Chromosome Location . Start  4248188
Chromosome Location . End  4248271
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F36A4.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46402 AMA-1 204.5 1856 Caenorhabditis elegans
 

Other

55 RNAi

WormBase ID
WBRNAi00077149
WBRNAi00085265
WBRNAi00083858
WBRNAi00083870
WBRNAi00083882
WBRNAi00002210
WBRNAi00064884
WBRNAi00087262
WBRNAi00098808
WBRNAi00046459
WBRNAi00065359
WBRNAi00079277
WBRNAi00113003
WBRNAi00075671
WBRNAi00113233
WBRNAi00087256
WBRNAi00098701
WBRNAi00024332
WBRNAi00008752
WBRNAi00075670
WBRNAi00025404
WBRNAi00098666
WBRNAi00106600
WBRNAi00065358
WBRNAi00069107
WBRNAi00079282
WBRNAi00079305
WBRNAi00079311
WBRNAi00079315
WBRNAi00079319

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F36A4.7 4248188 4248271 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000123 ama-1 F36A4.7 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F36A4.7 4248188 4248271 1
CDS:F36A4.7 4248322 4248431 1
CDS:F36A4.7 4248529 4248857 1
CDS:F36A4.7 4249342 4250062 1
CDS:F36A4.7 4250379 4250684 1
CDS:F36A4.7 4250991 4251771 1
CDS:F36A4.7 4252070 4252483 1
CDS:F36A4.7 4252874 4253614 1
CDS:F36A4.7 4254069 4255657 1
CDS:F36A4.7 4256060 4256267 1
CDS:F36A4.7 4256688 4256873 1
CDS:F36A4.7 4257681 4257782 1

1 Sequence

Length
5571

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F36A4.7.1 F36A4.7.1 6020   IV: 4248070-4258169