WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK180.5c.1 Sequence Name  ZK180.5c.1
Length (nt)  1484   Chromosome Location  IV: 4515044-4517153
Chromosome . Primary Identifier  IV Chromosome Location . Start  4515044
Chromosome Location . End  4517153 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK180.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022679 ZK180.5 ZK180.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK180.5c ZK180.5c 1200   IV: 4515299-4515475

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK180.5c.1 4515044 4517153 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119403   432   IV: 4515044-4515475 Caenorhabditis elegans
Exon119408   883   IV: 4515976-4516858 Caenorhabditis elegans
Exon119411   131   IV: 4516911-4517041 Caenorhabditis elegans
Exon119412   38   IV: 4517116-4517153 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK180.5c.1 4515044 4517153 -1

1 Sequence

Length
1484

1 Sequence Ontology Term

Identifier Name Description
transcript