WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28E10.2a Sequence Name  F28E10.2a
Length (nt)  798   Chromosome Location  IV: 4562665-4562888
Chromosome . Primary Identifier  IV Chromosome Location . Start  4562665
Chromosome Location . End  4562888
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28E10.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48748 SISS-1, isoform a 29.8 265 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00045839
WBRNAi00014053

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28E10.2a 4562665 4562888 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017901 siss-1 F28E10.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28E10.2a 4562665 4562888 1
CDS:F28E10.2a 4562937 4563057 1
CDS:F28E10.2a 4564106 4564200 1
CDS:F28E10.2a 4564250 4564308 1
CDS:F28E10.2a 4564537 4564710 1
CDS:F28E10.2a 4564765 4564889 1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28E10.2a.1 F28E10.2a.1 1815   IV: 4562650-4565891