WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28E10.4.2 Sequence Name  F28E10.4.2
Length (nt)  1090   Chromosome Location  IV: 4565961-4567429
Chromosome . Primary Identifier  IV Chromosome Location . Start  4565961
Chromosome Location . End  4567429 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28E10.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017902 F28E10.4 F28E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28E10.4 F28E10.4 975   IV: 4566018-4566146

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28E10.4.2 4565961 4567429 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119512   186   IV: 4565961-4566146 Caenorhabditis elegans
Exon119514   132   IV: 4566192-4566323 Caenorhabditis elegans
Exon119516   339   IV: 4566403-4566741 Caenorhabditis elegans
Exon119518   194   IV: 4566787-4566980 Caenorhabditis elegans
Exon119520   193   IV: 4567144-4567336 Caenorhabditis elegans
Exon119521   46   IV: 4567384-4567429 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28E10.4.2 4565961 4567429 -1

1 Sequence

Length
1090

1 Sequence Ontology Term

Identifier Name Description
transcript