WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28E10.4.1 Sequence Name  F28E10.4.1
Length (nt)  1096   Chromosome Location  IV: 4565961-4567443
Chromosome . Primary Identifier  IV Chromosome Location . Start  4565961
Chromosome Location . End  4567443 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28E10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017902 F28E10.4 F28E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28E10.4 F28E10.4 975   IV: 4566018-4566146

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28E10.4.1 4565961 4567443 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119511   186   IV: 4565961-4566146 Caenorhabditis elegans
Exon119513   132   IV: 4566192-4566323 Caenorhabditis elegans
Exon119515   339   IV: 4566403-4566741 Caenorhabditis elegans
Exon119517   194   IV: 4566787-4566980 Caenorhabditis elegans
Exon119519   185   IV: 4567144-4567328 Caenorhabditis elegans
Exon119522   60   IV: 4567384-4567443 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28E10.4.1 4565961 4567443 -1

1 Sequence

Length
1096

1 Sequence Ontology Term

Identifier Name Description
transcript