WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29B9.4a.2 Sequence Name  F29B9.4a.2
Length (nt)  1418   Chromosome Location  IV: 4653262-4655850
Chromosome . Primary Identifier  IV Chromosome Location . Start  4653262
Chromosome Location . End  4655850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29B9.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004205 psr-1 F29B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29B9.4a F29B9.4a 1203   IV: 4653394-4653551

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.4a.2 4653262 4655850 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon119783   70   IV: 4653262-4653331 Caenorhabditis elegans
Exon119785   167   IV: 4653385-4653551 Caenorhabditis elegans
Exon119789   121   IV: 4653607-4653727 Caenorhabditis elegans
Exon119792   153   IV: 4654235-4654387 Caenorhabditis elegans
Exon119796   527   IV: 4654765-4655291 Caenorhabditis elegans
Exon119802   380   IV: 4655471-4655850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F29B9.4a.2 4653262 4655850 1

1 Sequence

Length
1418

1 Sequence Ontology Term

Identifier Name Description
transcript