WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G9B.3.1 Sequence Name  Y17G9B.3.1
Length (nt)  1597   Chromosome Location  IV: 4761049-4762885
Chromosome . Primary Identifier  IV Chromosome Location . Start  4761049
Chromosome Location . End  4762885 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G9B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021200 cyp-31A3 Y17G9B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G9B.3 Y17G9B.3 1488   IV: 4761060-4761152

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G9B.3.1 4761049 4762885 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120049   104   IV: 4761049-4761152 Caenorhabditis elegans
Exon120050   401   IV: 4761199-4761599 Caenorhabditis elegans
Exon120051   97   IV: 4761643-4761739 Caenorhabditis elegans
Exon120052   95   IV: 4761788-4761882 Caenorhabditis elegans
Exon120053   715   IV: 4761931-4762645 Caenorhabditis elegans
Exon120054   185   IV: 4762701-4762885 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G9B.3.1 4761049 4762885 1

1 Sequence

Length
1597

1 Sequence Ontology Term

Identifier Name Description
transcript