WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G9A.6.1 Sequence Name  Y17G9A.6.1
Length (nt)  1171   Chromosome Location  IV: 4868609-4870646
Chromosome . Primary Identifier  IV Chromosome Location . Start  4868609
Chromosome Location . End  4870646 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G9A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006219 str-175 Y17G9A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G9A.6 Y17G9A.6 1026   IV: 4868754-4868824

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G9A.6.1 4868609 4870646 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon120523   216   IV: 4868609-4868824 Caenorhabditis elegans
Exon120525   178   IV: 4868870-4869047 Caenorhabditis elegans
Exon120526   274   IV: 4869099-4869372 Caenorhabditis elegans
Exon120527   135   IV: 4869560-4869694 Caenorhabditis elegans
Exon120528   79   IV: 4870189-4870267 Caenorhabditis elegans
Exon120529   88   IV: 4870313-4870400 Caenorhabditis elegans
Exon120531   201   IV: 4870446-4870646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G9A.6.1 4868609 4870646 -1

1 Sequence

Length
1171

1 Sequence Ontology Term

Identifier Name Description
transcript