WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:AC7.2c Sequence Name  AC7.2c
Length (nt)  1896   Chromosome Location  IV: 5127402-5127622
Chromosome . Primary Identifier  IV Chromosome Location . Start  5127402
Chromosome Location . End  5127622
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
AC7.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49353 SOC-2, isoform c 70.2 631 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00067894
WBRNAi00068109
WBRNAi00038602
WBRNAi00007349
WBRNAi00101967
WBRNAi00009515
WBRNAi00027803
WBRNAi00022782
WBRNAi00086092

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:AC7.2c 5127402 5127622 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004929 soc-2 AC7.2 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:AC7.2c 5127402 5127622 -1
CDS:AC7.2c 5129027 5129377 -1
CDS:AC7.2c 5129749 5129968 -1
CDS:AC7.2c 5130433 5130635 -1
CDS:AC7.2c 5131299 5131515 -1
CDS:AC7.2c 5131763 5131915 -1
CDS:AC7.2c 5132105 5132236 -1
CDS:AC7.2c 5144715 5144852 -1
CDS:AC7.2c 5152207 5152467 -1

1 Sequence

Length
1896

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:AC7.2c.1 AC7.2c.1 2281   IV: 5127041-5152491